NBIK13016U Mycology
Week 1: Fungal diversity 1: phylogeny, taxonomy, life-styles,
nutritional modes
- Ascomycota
- Basiodiomycota
Week 2: Fungal diversity 2: phylogeny, taxonomy, life-styles,
nutritional modes
- Basal lineages
- Oomycota
Week 3: Fungal diversity 3: phylogeny, taxonomy, life-styles,
nutritional modes
- Structure and differentiation and nutrient acquisition
- Dispersal and survival
Week 4: Fungal populations and genetics
- Genetics and mating types
- Population genetics
- Development of molecular markers and analysis
Week 5: Fungal community assembly and guilds
- Mycorrhizal communities
- Wood decaying communities
- Community analyses; high throughput sequencing and analysis
Week 6: Fungal interactions 1
- Plant pathogens: Ecology and lifecycles
- Monitoring plant pathogens; emerging diseases
Week 7: Fungal interactions 2
- Fungal infections in insects
- Fungal interactions with humans and animals
- To provide an understanding of the biology, diversity,
life-styles and nutritional modes of the main fungal lineages
- To identify the main interactions between fungi and plants
and fungi and insects
- To develop practical skills for growing fungi in pure cultures
and perform simple growth and mating experiments
- To obtain knowledge of molecular marker selection, molecular
detection and current metagenomic tools.
Knowledge:
By the end of the course students are expected to:
describe the diversity of fungi in the light of
phylogeny, life-styles and nutritional modes
explain how fungi interact with plants and insects
in beneficial and harmful ways
critically evaluate different (molecular) methods
for detection of specific fungi, detecting the genetic variation in
populations and identifying species in complex communities
discuss, put into perspective, and criticize
original research papers in modern mycology
Skills:
work experimentally with fungi including growing,
transferring and setting up small experiments with fungi in pure
culture
use their acquired knowledge of microbial
diversity and ecology in designing identification, detection of
species in communities or individuals in populations
Competencies:
By participating in this course the students should be able to
integrate knowledge of fungal diversity its broadest sense into
designing and perform appropriate solutions to specific questions
within mycology. In doing this, students should be able to take
into the consideration the complexities of the system i.e.
phylogenetic and functional diversity and the interacting with
other organisms and with the environment. Students should be able
to put fungi into general ecological, biological and microbial
ecological contexts.
- Category
- Hours
- Colloquia
- 14
- Exam
- 37
- Guidance
- 14
- Lectures
- 21
- Preparation
- 78
- Project work
- 21
- Theory exercises
- 21
- Total
- 206
- Credit
- 7,5 ECTS
- Type of assessment
- Oral examination, 20 minutesOral examination, 20 minutes based on an original scientific paper handed out 7 days before the exam and text book curriculum.
- Exam registration requirements
- In order to be allowed to the final exam, the student should have participated actively in the course by being present minimum 80% at the exercises, and by performing satisfactory oral presentations based on weekly assignments.
- Marking scale
- 7-point grading scale
- Censorship form
- No external censorship
- Re-exam
- Same as ordinary exam
Criteria for exam assesment
Course information
- Language
- English
- Course code
- NBIK13016U
- Credit
- 7,5 ECTS
- Level
- Full Degree Master
- Duration
- 1 block
- Placement
- Block 3
- Schedule
- A
- Course capacity
- 30
- Continuing and further education
- Study board
- Study Board of Biology and Animal Science
Contracting department
- Department of Biology
Course responsibles
- Rasmus Kjøller (rasmusk@bio.ku.dk)
Lecturers
Rasmus Kjøller, Søren Rosendahl, Ulrik Søchting, Jacob Heilmann-Clausen (all KU-BIO) and Annette Bruun Jensen (KU-PLEN